Calcium signaling is a key mechanism in plant physiology, where dynamic changes in intracellular calcium levels generate complex spatio-temporal patterns known as calcium signatures. This thesis aim to implement an automated pipeline written in MATLab for processing fluorescece images of plant roots and extrancting quantitative descriptor of calcium dynamic. These features are then analyzed using unsupervised approaches to explore the presence of intrinsic patterns within the data.

Calcium signaling is a key mechanism in plant physiology, where dynamic changes in intracellular calcium levels generate complex spatio-temporal patterns known as calcium signatures. This thesis aim to implement an automated pipeline written in MATLab for processing fluorescece images of plant roots and extrancting quantitative descriptor of calcium dynamic. These features are then analyzed using unsupervised approaches to explore the presence of intrinsic patterns within the data.

Automated Image Processing and Signal Extraction from Fluorescence Imaging for the Analysis of Calcium Dynamics in Plant Roots

FEDERICI, MATTEO
2025/2026

Abstract

Calcium signaling is a key mechanism in plant physiology, where dynamic changes in intracellular calcium levels generate complex spatio-temporal patterns known as calcium signatures. This thesis aim to implement an automated pipeline written in MATLab for processing fluorescece images of plant roots and extrancting quantitative descriptor of calcium dynamic. These features are then analyzed using unsupervised approaches to explore the presence of intrinsic patterns within the data.
2025
Automated Image Processing and Signal Extraction from Fluorescence Imaging for the Analysis of Calcium Dynamics in Plant Roots
Calcium signaling is a key mechanism in plant physiology, where dynamic changes in intracellular calcium levels generate complex spatio-temporal patterns known as calcium signatures. This thesis aim to implement an automated pipeline written in MATLab for processing fluorescece images of plant roots and extrancting quantitative descriptor of calcium dynamic. These features are then analyzed using unsupervised approaches to explore the presence of intrinsic patterns within the data.
Calcium imaging data
Image analysis
Unsupervised learnin
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Utilizza questo identificativo per citare o creare un link a questo documento: https://hdl.handle.net/20.500.12608/109292